Setting up the workplace
Read in data for various scenarios
- Scenario 0: Baseline
- Scenario 01: Movement restrictions
- Scenario 02: Movement restrictions and hunting pressure
- Scenario 03: Movement restrictions, hunting pressure and fencing
Variables from the ‘EC’ folder:
- cycle: time step of the simulation.
- Infected_P: Number of infected pig herds.
- Infected_WB: Number of infected wild Boars.
- Sim: Iteration of the simulation.
Plot of infected domestic pigs and wild boars over time
Scenario 0: Baseline

Scenario 01: Movement restrictions

Scenario 02: Movement restrictions and hunting pressure

Scenario 03: Movement restrictions, hunting pressure and fencing

Maps of infected areas
Variables from the Agents folder:
- idhex: Id of the hexagonal cell.
- Epidemic: Number of times that there was an epidemic on that polygon.
- introduction_ph: Number of times that an infected pig was introduced to the polygon from other polygon.
- introduction_wb: Number of times the disease was transmitted from wild boars to a pig herd.
Scenario 0: Baseline

Scenario 01: Movement restrictions

Scenario 02: Movement restrictions and hunting pressure

Scenario 03: Movement restrictions, hunting pressure and fencing

Summary plot

## # A tibble: 4 x 2
## S `median(I_P)`
## <chr> <dbl>
## 1 Scenario 0 16.9
## 2 Scenario 1 14.5
## 3 Scenario 2 13.0
## 4 Scenario 3 11.9
## [1] 0.2314539
## [1] 0.2977669